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 * Presentation:

Cytoscape User Tutorial

  • Friday, July 18, 2008
  • Lead: Scooter Morris, UCSF
  • Location: CCBR Black Room
  • Time: 9am-noon
  • Presentation:

Description

This will be part Tutorial/part interactive guided "How-To"s in response to participant questions. Bring your issues and questions and after providing a general overview of Cytoscape development, we'll dive in and answer as many questions, issues, and scenarios as possible. I plan on bringing lots of small code examples that we can work through.

Outline

  • Concepts
  • API Layers
  • Working with:
    • Graph model (networks, nodes, edges)
    • View
    • Attributes
  • Break (yay!)
  • How-To's -- Possible topics:
    • Tunables
    • Layouts
    • Groups
    • Vizmap
    • ???

CytoscapeRetreat2008/DeveloperTutorial (last edited 2009-02-12 01:03:23 by localhost)

Funding for Cytoscape is provided by a federal grant from the U.S. National Institute of General Medical Sciences (NIGMS) of the Na tional Institutes of Health (NIH) under award number GM070743-01. Corporate funding is provided through a contract from Unilever PLC.

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