A B C D E F G H I K M N O P R S U W

B

BIOMOLECULE_VISUAL_STYLE - Static variable in class cytoscape.editor.editors.MapBioMoleculeEditorToVisualStyle
 
BIOMOLECULE_VISUAL_STYLE - Static variable in class cytoscape.editor.editors.SimpleBioMoleculeEditor
 
BIOPAX_NAME_ATTRIBUTE - Static variable in class cytoscape.editor.editors.BasicCytoscapeEditor
Cytoscape Attribute: BioPAX Name.
BIOPAX_NODE_TYPE - Static variable in class cytoscape.editor.CytoscapeEditorManager
attribute used for BioPAX-like editor
BasicCytoShapeEntity - class cytoscape.editor.impl.BasicCytoShapeEntity.
The BasicCytoShapeEntity class defines draggable/droppable visual components in the Cytoscape editor framework.
BasicCytoShapeEntity(String, String, Icon, String) - Constructor for class cytoscape.editor.impl.BasicCytoShapeEntity
 
BasicCytoShapeTransferHandler - class cytoscape.editor.event.BasicCytoShapeTransferHandler.
transfer handler for shapes that are dragged from the palette onto the canvas.
BasicCytoShapeTransferHandler() - Constructor for class cytoscape.editor.event.BasicCytoShapeTransferHandler
creates a DataFlavor for the BasicCytoShapeEntity class
BasicCytoShapeTransferHandler(BasicCytoShapeEntity, Object[]) - Constructor for class cytoscape.editor.event.BasicCytoShapeTransferHandler
creates a DataFlavor and sets instance variables for a BasicCytoShapeEntity that is added to the palette
BasicCytoscapeEditor - class cytoscape.editor.editors.BasicCytoscapeEditor.
The BasicCytoscapeEditor provides base level graph editing functionality for Cytoscape, in particular the base level methods for adding nodes, edges, and context menu items.
BasicCytoscapeEditor() - Constructor for class cytoscape.editor.editors.BasicCytoscapeEditor
 
BasicNetworkEditEventHandler - class cytoscape.editor.event.BasicNetworkEditEventHandler.
The BasicNetworkEditEventHandler class provides specialized methods defining the behavior of the basic Cytoscape editor provided in Cytoscape 2.2.
BasicNetworkEditEventHandler() - Constructor for class cytoscape.editor.event.BasicNetworkEditEventHandler
 
BasicNetworkEditEventHandler(CytoscapeEditor) - Constructor for class cytoscape.editor.event.BasicNetworkEditEventHandler
 
BasicNetworkEditEventHandler(CytoscapeEditor, CyNetworkView) - Constructor for class cytoscape.editor.event.BasicNetworkEditEventHandler
 
BioPAXNetworkEditEventHandler - class cytoscape.editor.event.BioPAXNetworkEditEventHandler.
Event handler for SimpleBioPAX_Editor.
BioPAXNetworkEditEventHandler() - Constructor for class cytoscape.editor.event.BioPAXNetworkEditEventHandler
 
BioPAXNetworkEditEventHandler(CytoscapeEditor) - Constructor for class cytoscape.editor.event.BioPAXNetworkEditEventHandler
 
BioPAXNetworkEditEventHandler(CytoscapeEditor, CyNetworkView) - Constructor for class cytoscape.editor.event.BioPAXNetworkEditEventHandler
 
beginEdge(Point2D, NodeView) - Method in class cytoscape.editor.event.BasicNetworkEditEventHandler
begin drawing an edge from the input point
buildVisualStyle() - Method in interface cytoscape.editor.CytoscapeEditor
build the visual style for this editor should be overidden by specialized editors
buildVisualStyle() - Method in class cytoscape.editor.editors.BasicCytoscapeEditor
build the visualStyle for this editor this code should be overidden by more specialized editors that programmatically create a visual style
buildVisualStyle() - Method in class cytoscape.editor.editors.SimpleBioMoleculeEditor
 

A B C D E F G H I K M N O P R S U W