Overview
Package
Class
Use
Tree
Deprecated
Index
Help
PREV LETTER
NEXT LETTER
FRAMES
NO FRAMES
All Classes
A
B
C
D
E
F
G
H
I
K
M
N
O
P
R
S
U
W
B
BIOMOLECULE_VISUAL_STYLE
- Static variable in class cytoscape.editor.editors.
MapBioMoleculeEditorToVisualStyle
BIOMOLECULE_VISUAL_STYLE
- Static variable in class cytoscape.editor.editors.
SimpleBioMoleculeEditor
BIOPAX_NAME_ATTRIBUTE
- Static variable in class cytoscape.editor.editors.
BasicCytoscapeEditor
Cytoscape Attribute: BioPAX Name.
BIOPAX_NODE_TYPE
- Static variable in class cytoscape.editor.
CytoscapeEditorManager
attribute used for BioPAX-like editor
BasicCytoShapeEntity
- class cytoscape.editor.impl.
BasicCytoShapeEntity
.
The
BasicCytoShapeEntity
class defines draggable/droppable visual components in the Cytoscape editor framework.
BasicCytoShapeEntity(String, String, Icon, String)
- Constructor for class cytoscape.editor.impl.
BasicCytoShapeEntity
BasicCytoShapeTransferHandler
- class cytoscape.editor.event.
BasicCytoShapeTransferHandler
.
transfer handler for shapes that are dragged from the palette onto the canvas.
BasicCytoShapeTransferHandler()
- Constructor for class cytoscape.editor.event.
BasicCytoShapeTransferHandler
creates a DataFlavor for the BasicCytoShapeEntity class
BasicCytoShapeTransferHandler(BasicCytoShapeEntity, Object[])
- Constructor for class cytoscape.editor.event.
BasicCytoShapeTransferHandler
creates a DataFlavor and sets instance variables for a BasicCytoShapeEntity that is added to the palette
BasicCytoscapeEditor
- class cytoscape.editor.editors.
BasicCytoscapeEditor
.
The
BasicCytoscapeEditor
provides base level graph editing functionality for Cytoscape, in particular the base level methods for adding nodes, edges, and context menu items.
BasicCytoscapeEditor()
- Constructor for class cytoscape.editor.editors.
BasicCytoscapeEditor
BasicNetworkEditEventHandler
- class cytoscape.editor.event.
BasicNetworkEditEventHandler
.
The
BasicNetworkEditEventHandler
class provides specialized methods defining the behavior of the basic Cytoscape editor provided in Cytoscape 2.2.
BasicNetworkEditEventHandler()
- Constructor for class cytoscape.editor.event.
BasicNetworkEditEventHandler
BasicNetworkEditEventHandler(CytoscapeEditor)
- Constructor for class cytoscape.editor.event.
BasicNetworkEditEventHandler
BasicNetworkEditEventHandler(CytoscapeEditor, CyNetworkView)
- Constructor for class cytoscape.editor.event.
BasicNetworkEditEventHandler
BioPAXNetworkEditEventHandler
- class cytoscape.editor.event.
BioPAXNetworkEditEventHandler
.
Event handler for SimpleBioPAX_Editor.
BioPAXNetworkEditEventHandler()
- Constructor for class cytoscape.editor.event.
BioPAXNetworkEditEventHandler
BioPAXNetworkEditEventHandler(CytoscapeEditor)
- Constructor for class cytoscape.editor.event.
BioPAXNetworkEditEventHandler
BioPAXNetworkEditEventHandler(CytoscapeEditor, CyNetworkView)
- Constructor for class cytoscape.editor.event.
BioPAXNetworkEditEventHandler
beginEdge(Point2D, NodeView)
- Method in class cytoscape.editor.event.
BasicNetworkEditEventHandler
begin drawing an edge from the input point
buildVisualStyle()
- Method in interface cytoscape.editor.
CytoscapeEditor
build the visual style for this editor should be overidden by specialized editors
buildVisualStyle()
- Method in class cytoscape.editor.editors.
BasicCytoscapeEditor
build the visualStyle for this editor this code should be overidden by more specialized editors that programmatically create a visual style
buildVisualStyle()
- Method in class cytoscape.editor.editors.
SimpleBioMoleculeEditor
Overview
Package
Class
Use
Tree
Deprecated
Index
Help
PREV LETTER
NEXT LETTER
FRAMES
NO FRAMES
All Classes
A
B
C
D
E
F
G
H
I
K
M
N
O
P
R
S
U
W