Differences between revisions 2 and 3

Agilent Literature Search Recipe

Allan Kuchinsky

Agilent Technologies

Biological Use Case: Generate biological networks by extracting associations from scientific literature and other unstructured text. This demonstration is associated with a study into cardiovascular disease, in which the interpretation of microarray data is augmented by generating biological networks for a list of highly regulated genes.

Recipe

Cytoscape version: Version number (2.6)

Plugins to Load: Plugins and urls

GUI steps:

Describe each step (story), the GUI action to take, and probable remarks

Story	Action	Remarks
generate biological network for a list of genes	type a list of gene names into the terms area. For this example, use cancer-re;at

Data / Session Files: Attach (preferably) a session file or else the data files used in the workflow

Presentation: Attach your presentation

Webstart: Attach a webstart

Video: Attach a video link

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Diff for "AgilentLiteratureSearchRecipe"

Agilent Literature Search Recipe