Diff for "API" - Cytoscape Wiki

Differences between revisions 7 and 8

To give you a better idea of how the interfaces work together, here is an example:

Example 1. Algorithm calculated groups:

{{{CyNetwork [] groups = someAlgorithm.calculateGroups(someArgs); groupManager.addGroupsToNetwork(myNetwork); GroupingStrategy collapsingStrategy = GroupingStrategyFactory.createGroupingStrategy(GroupingStrategyFactory.COLLAPSING_STRATEGY); GroupingStrategy stackingStrategy = GrouupingStrategyFactory.createGroupingStrategy(GroupingStrategyFactory.STACKING_STRATEGY); for(int i = 0; i < groups.length; i++){

if(groups[i].nodeCount() > SOME_LIMIT){
- collapsingStrategy.group(myNetwork,groups[i]); // this collapses the groups
}else{
- stackingStrategy.group(myNetwork,groups[i]); // this aligns the nodes in a stack
}

}

}}}

-  ← Revision 7 as of 2006-02-28 02:05:26 →
  Size: 895
  Editor: pix39
  Comment:
+  ← Revision 8 as of 2006-02-28 02:05:56 →
  Size: 883
  Editor: pix39
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 7:
-{{{CyNetwork [] groups = someAlgorithm.calculateGroups(someArgs);}}}

{{{groupManager.addGroupsToNetwork(myNetwork);}}}

{{{GroupingStrategy collapsingStrategy = GroupingStrategyFactory.createGroupingStrategy(GroupingStrategyFactory.COLLAPSING_STRATEGY);
+{{{CyNetwork [] groups = someAlgorithm.calculateGroups(someArgs);

groupManager.addGroupsToNetwork(myNetwork);

GroupingStrategy collapsingStrategy = GroupingStrategyFactory.createGroupingStrategy(GroupingStrategyFactory.COLLAPSING_STRATEGY);