Diff for "API" - Cytoscape Wiki

Differences between revisions 10 and 11

To give you a better idea of how the interfaces work together, here is an example:

Example 1. Algorithm calculated groups:

{{{CyNetwork [] groups = someAlgorithm.calculateGroups(someArgs); groupManager.addGroupsToNetwork(myNetwork); GroupingStrategy collapsingStrategy =

GroupingStrategy stackingStrategy =

for(int i = 0; i < groups.length; i++){

if(groups[i].nodeCount() > SOME_LIMIT){
- collapsingStrategy.group(myNetwork,groups[i]); // this collapses the groups
}else{
- stackingStrategy.group(myNetwork,groups[i]); // this aligns the nodes in a stack
}

}

}}}

Notes:

1 I decided to name the interfaces in this API using the "group" word instead of the "MetaNode" word. A "MetaNode" is a way of grouping nodes/edges in a graph. The more general concept here is grouping. 2

-  ← Revision 10 as of 2006-02-28 02:11:41 →
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  Editor: pix39
  Comment:
+  ← Revision 11 as of 2006-02-28 02:14:55 →
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  Editor: pix39
  Comment:
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+Notes:



 1 I decided to name the interfaces in this API using the "group" word instead of the "MetaNode" word. A "MetaNode" is a way of grouping nodes/edges in a graph. The more general concept here is grouping.

 2